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Accepted Papers

1. Regular Papers

PaperID	Title	Author	Category
B211	Manifold learning reveals nonlinear structure in metagenomic profiles	Xingpeng Jiang and Huiyue Shen	Genomics and Molecular Structure, Function and Evolution
B225	Efficient Filtration for Similarity Search with Spaced k-mer Neighbors	Weiming Li, Bin Ma, and Kaizhong Zhang	Computational Systems Biology
B233	Robust Segmentation of Biomedical Figures Toward an Image-based Document Retrieval	Luis Lopez, Jingyi Yu, Catalina Tudor, Cecilia Arighi, Hongzhan Huang, K Vijay-Shanker, and Cathy Wu	Medical Informatics and Translational Bioinformatics
B236	Predicting distant metastasis in breast cancer using ensemble classifier based on context-specific miRNA regulation modules	Xionghui Zhou and Juan Liu	Medical Informatics and Translational Bioinformatics
B258	Integrating Protein Networks for Identifying Cooperative miRNA Activity in Disease Gene Signatures	Mohammed Alshalalfa and Reda Alhajj	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B260	PPIExtractor: A Protein-Protein Interaction Extractor for Biomedical Literature	Zhihao Yang, Zhehuan Zhao, Yanpeng Li, Yuncui Hu, and Hongfei Lin	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B263	A Log-Linear Graphical Model for Inferring Genetic Networks from High-Throughput Sequencing Data	Genevera Allen and Zhandong Liu	Computational Systems Biology
B264	Drug-induced QT Prolongation Prediction Using Co-regularized Multi-view Learning	Jintao Zhang, Gerald Lushington, and Jun Huan	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B268	MultiFacTV: Finding Modules from Higher-order Gene Expression Profiles with Time Dimension	Xutao Li, Yunming Ye, Michael Ng, and Qingyao Wu	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B276	Epileptic EEG Signal Analysis and Identification Based On Nonlinear Features	Yuedong Song and Jiaxiang Zhang	Medical Informatics and Translational Bioinformatics
B278	Modeling Semantic Influence for Biomedical Research Topics using MeSH Hierarchy	Dan He	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B284	A Monte Carlo Approach to Biomedical Timeseries Search	Jonathan Woodbridge, Bobak Mortazavi, Majid Sarrafzadeh, and Alex Bui	Medical Informatics and Translational Bioinformatics
B285	Prediction of Novel Systems Components in Cell Cycle Regulation in Malaria Parasite by Subnetwork Alignments	Hong Cai, Changjin Hong, Jianying Gu, Timothy Lilburn, Rui Kuang, and Yufeng Wang	Computational Systems Biology
B289	Multi-Instance Learning for Skin Biopsy Image Features Recognition	Gang Zhang, Xiangyang Shu, Yunting Liang, Shuyi Chen, and Jian Yin	Medical Informatics and Translational Bioinformatics
B293	LSH-Div: Species Diversity Estimation using Locality Sensitive Hashing	Zeehasham Rasheed, Huzefa Rangwala, and Daniel Barbara	Genomics and Molecular Structure, Function and Evolution
B297	M-Finder: functional association mining from protein interaction networks weighted by semantic similarity	Young-Rae Cho, Tak Chien Chiam, and Yanxin Lu	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B298	Significance Analysis by Minimizing False Discovery Rate	Yuanzhe Bei and Pengyu Hong	Computational Systems Biology
B299	SiS: Significant Subnetworks in Massive Number of Network Topologies	Md Mahmudul Hasan, Yusuf Kavurucu, and Tamer Kahveci	Computational Systems Biology
B303	Early Classification of Multivariate Time Series Using a Hybrid HMM/SVM model	Mohamed Ghalwash, Dusan Ramljak, and Zoran Obradovic	Medical Informatics and Translational Bioinformatics
B307	Efficient Basin Hopping in the Protein Energy Surface	Brian Olson and Amarda Shehu	Genomics and Molecular Structure, Function and Evolution
B310	Identifying Context-Specific Transcription Factor Targets from Prior Knowledge and Gene Expression Data	Elana J Fertig, Alexander V Favorov, and Michael F Ochs	Computational Systems Biology
B314	Integration of Multiple Annotators by Aggregating Experts and Filtering Novices	Ping Zhang and Zoran Obradovic	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B319	Network-based Inferring Drug-Disease Associations from Chemical, Genomic and Phenotype Data	Yu-Fen Huang, Hsiang-Yuan Yeh, and Von-Wun Soo	Medical Informatics and Translational Bioinformatics
B320	A Data Mining Approach for Optimization of Acute Inflammation Therapy	Vladan Radosavljevic, Kosta Ristovski, and Zoran Obradovic	Medical Informatics and Translational Bioinformatics
B332	Efficient Mining Sequential Patterns for Structural Motifs with Gap Constraints	Chiang-Chi Liao, and Ming-Syan Chen	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B339	Parallel Simulation of Apoptotic Receptor-Clustering on GPGPU Many-Core Architectures	Claus Braun, Markus Daub, Alexander Schöll, Guido Schneider, and Hans-Joachim Wunderlich	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B343	Using Similarity Learning to Improve Network-based Gene Function Prediction	Ngo Phuong Nhung and Tu Minh Phuong	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B346	Aligning protein-protein interaction networks using random neural networks	Hang Phan, Michael Sternberg, and Erol Gelenbe	Computational Systems Biology
B364	Prediction of Human Immunodeficiency Virus Type 1 Drug Resistance: Representation of Target Sequence Mutational Patterns via an n-Grams Approach	Majid Masso	Medical Informatics and Translational Bioinformatics
B366	Improving Interacting Residue Prediction Using Long-Distance Information in Hidden Markov Models	Colin Kern, Alvaro Gonzalez, Li Liao, and Vijay Shanker	Genomics and Molecular Structure, Function and Evolution
B378	Improving Health Records Search using Multiple Query Expansion Collections	Dongqing Zhu and Ben Carterette	Medical Informatics and Translational Bioinformatics
B381	Efficient fluctuation analysis of biochemical pathways beyond the linear noise approximation using iNA	Philipp Thomas, Hannes Matuschek, and Ramon Grima	Computational Systems Biology
B385	Data Driven Knowledge Acquisition Method for Domain Knowledge Enrichment in the Healthcare	Sujan Perera, Cory Henson, Krishnaprasad Thirunarayan, Amit Sheth, and Suhas Nair	Healthcare Informatics
B388	Identifying Protein Complexes Based on Local Fitness Method	Jun Ren, Jianxin Wang, and Min Li	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B392	iSimp: A Sentence Simplification System for Biomedical Text	Yifan Peng, Catalina O. Tudor, Manabu Torii, Cathy H. Wu, and K. Vijay-Shanker	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B407	Classification of Multicolor Fluorescence In-Situ Hybridization (M-FISH) Image Using Structure Based Sparse Representation Model	Jinyao Li and Yu-Ping Wang	Medical Informatics and Translational Bioinformatics
B410	Biomarker Identification for Diagnosis of Schizophrenia with Integrated Analysis of fMRI and SNPs	Hongbao Cao and Yu-Ping Wang	Medical Informatics and Translational Bioinformatics
B414	A Hybrid Data Mining Temporal Approach for Medical Data using Self Adaptive Fuzzy Maps	Seyyed Mohamamd Reza Farshchi	Computational Systems Biology
B417	Combining gene expression and function in a spatially localized approach	Evangelia Zacharaki, Angeliki Skoura, Li An, Desmond Smith, Scott Faro, and Vasileios Megalooikonomou	Computational Systems Biology
B422	An Accurate Scalable Template-based Alignment Algorithm	David Gardner, Weijia Xu, Jamie Cannone, Daniel Miranker, Stuart Ozer, and Robin Gutell	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B430	PhylOnt: A Domain-Specific Ontology for Phylogeny Analysis	Maryam Panahiazar, Ajith Ranabahu, Vahid Taslimitehrani, Hima Yalamanchili, Arlin Stoltzfus, Jim Leebens_Mack, and Amit Sheth	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B440	A New Method for Identifying Protein-Protein Interaction by Analyzing TAP/MS Data	Xiaoyun Sun, Pengyu Hong, Meghana Kulkarni, Young Kwon, and Norbert Perrimon	Computational Systems Biology
B446	A Multi-Objective Program for Quantitative Subtyping of Clinically Relevant Phenotypes	Jiangwen Sun, Jinbo Bi, Joel Gelernter, and Henry Kranzler	Medical Informatics and Translational Bioinformatics
B447	A Novel Dynamic Graph-Based Computational Model for Predicting Salivary Gland Branching Morphogenesis	Nimit Dhulekar, Lauren Bange, Abhirami Baskaran, Daniel Yuan, Basak Oztan, Bulent Yener, Shayoni Ray, and Melinda Larsen	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B459	A two-variable model for stochastic modelling of chemical events with multi-stepreactions	Qianqian Wu, Kate Smith-Miles, and Tianhai Tian	Computational Systems Biology
B463	Identifying Protein Binding Functionality of the Cytochrome C. and Ubiquitin Protein Families by Aligned Pattern Clusters	En-Shiun Annie Lee and Andrew K. C. Wong	Computational Systems Biology
B466	Comprehensive human membrane protein database	Min-sung Kim and Gwan-Su Yi	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B467	A Weighted Hypergeometric Statistic for the Enrichment of Gene Sets	Rehman Qureshi and Ahmet Sacan	Computational Systems Biology
B468	Adaptive feature selection for array data analysis and its application to breast cancer prognostic biomarker discovery	Jie Cheng, Joel Greshock, Leming Shi, Jeff Painter, Xiwu Lin, Kwan Lee, Shu Zheng, Richard Wooster, Lajos Pusztai, and Alan Menius	Computational Systems Biology
B471	Labor Contraction Prediction via Demographic and Obstetrical Information Analysis	Zifang Huang, Mei-Ling Shyu, James Tien, David Birnbach, and Michael Vigoda	Medical Informatics and Translational Bioinformatics
B475	Fast Sparse Representation Approaches for the Classification of High-Dimensional Biological Data	Yifeng Li and Alioune Ngom	Computational Systems Biology
B477	Novel Features for Categorizing Biomedical Images	Jianqiang Sheng, Songhua Xu, and Weicai Deng	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B479	CWT-PLSR for Quantitative Analysis of Raman Spectrum	Shuo Li, Jean Gao, James Nyagilo, and Digant Dave	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B481	Estimating a gene's mutation burden by the number of observed synonymous base substitutions	Perry Evans and Michael Krauthammer	Genomics and Molecular Structure, Function and Evolution
B484	A Discrete Bayesian Network Framework for Discrimination of Gene Expression Profiles	Nikolay Balov	Computational Systems Biology
B486	A random walk based approach for improving protein-protein interaction network and protein complex prediction	Chengwei Lei and Jianhua Ruan	Computational Systems Biology
B492	Unsupervised Kernel Parameter Estimation by Constrained Nonlinear Optimization for Clustering Nonlinear Biological Data	Hyokyeong Lee and Rahul Singh	Computational Systems Biology
B498	De-noise Biological Network from Heterogeneous Sources via Link Propagation	Nan Du, Jing Gao, Vishrawas Gopalakrishna, and Aidong Zhang	Genomics and Molecular Structure, Function and Evolution
B499	A Link Prediction based Unsupervised Rank Aggregation Algorithm for Informative Gene Selection	Kang Li, Nan Du, and Aidong Zhang	Cross-Cutting Computational Methods and Bioinformatics Infrastructure

2. Short Papers

PaperID	Title	Author	Category
B202	Keyword Annotation of Biomedical Documents with Graph-based Similarity Methods	Shuguang Wang	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B207	Extending the Ball-Histogram Method with Continuous Distributions and an Application to Prediction of DNA-Binding Proteins	Ondrej Kuzelka, Andrea Szaboova, and Filip Zelezny	Genomics and Molecular Structure, Function and Evolution
B218	Pre-miRNA Classification via Combinatorial Feature Mining and Boosting	Jason Wang, Ling Zhong, Dongrong Wen, and Bruce Shapiro	Genomics and Molecular Structure, Function and Evolution
B237	The Role of Eigen-matrix Translation in Classification of Biological Datasets	Hao Jiang and Wai-Ki Ching	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B240	Drug-Target Network in Myocardial Infarction: a Structural Analysis	Haiying Wang, Huiru Zheng, Francisco Azuaje, and Xingming Zhao	Computational Systems Biology
B242	Immune System Simulation: Modeling the Mast Cell	Charles da Silva, Alcione Oliveira, Maurílio Possi, Fabio Cerqueira, Andreia Gomes, Rodrigo Siqueira-Batista, and Luiz Alberto Santana	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B247	A Model of Cellular Decision Making in Photodynamic Therapy of Cancer	ioannis gkigkitzis and Xin Hua Hu	Computational Systems Biology
B249	OWA-PSSM - A Position Specific Scoring Matrix based Method Integrated with OWA Weights for HLA-DR Peptide Binding Prediction	Wen-Jun Shen and Hau-San Wong	Genomics and Molecular Structure, Function and Evolution
B251	A Semi-Supervised Learning Method for Names of Traditional Chinese Prescriptions and Drugs Recognition	Dongfeng Cai, Changlin Ding, Yu Bai, and Guiping Zhang	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B252	Similarity Analysis of Feature Ranking Techniques on Imbalanced DNA Microarray Datasets	David Dittman, Taghi Khoshgoftaar, Randall Wald, and Amri Napolitano	Computational Systems Biology
B255	Bridging Encounter Forms and Electronic Medical Record Databases: Annotation, Mapping, and Integration	Yuan An, Ritu Khare, Xiaohua Hu, and Il-Yeol Song	Healthcare Informatics
B270	Automatic Analysis Method of Protein Expression images based on Generalized Data Field	Shuliang Wang, Ying Li, Wenchen Tu, and Peng Wang	Medical Informatics and Translational Bioinformatics
B271	Using microenvironments to identify allosteric binding sites	Christopher Foley, Sana AlAzwari, Mark Dufton, and John Wilson	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B275	The Effect of Unhealthy β-cells in Synchronized Insulin Secretion	Yang Pu, Saangho Lee, David Samuels, Layne Watson, and Yang Cao	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B277	The Effect of Measurement Approach and Noise Level on Gene Selection Stability	Randall Wald, Taghi Khoshgoftaar, and Ahmad Abu Shanab	Computational Systems Biology
B282	Recognizing Drosha processing sites by a two-step prediction model with structure and sequence informaiton	Xingchi Hu, Chuang Ma, and Yanhong Zhou	Computational Systems Biology
B286	Rotation Crossover and K-Site Move Mutation for Evolutionary Protein Folding on 3D FCC HP Model	Shih-Chieh Su and Jyh-Jong Tsay	Genomics and Molecular Structure, Function and Evolution
B288	Identifying essential proteins via integration of protein interaction and gene expression data	Xi-wei Tang, Jianxin Wang, and Yi Pan	Genomics and Molecular Structure, Function and Evolution
B290	Incorporating Semantic Similarity into Clustering Process for Identifying Protein Complexes from Affinity Purification/Mass Spectrometry Data	Bingjing Cai, Haiying Wang, Huiru Zheng, and Hui Wang	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B291	Combining Homolog and Motif Similarity Data with Gene Ontology Relationships for Protein Function Prediction	Hafeez HafeezurRehman, Alfredo Benso, Stefano Di Carlo, Gianfranco Politano, Alessandro Savino, and Prashanth Suravajhala	Genomics and Molecular Structure, Function and Evolution
B295	Identifying enterotype in human microbiome by decomposing topics of probabilistic topic models into components	Xingpeng Jiang, Dushoff Jonathan, Xin Chen, and Xiaohua Hu	Genomics and Molecular Structure, Function and Evolution
B296	Modelling Non-Stationary Gene Regulatory Process with Hidden Markov Dynamic Bayesian Network	shijia zhu and yadong wang	Computational Systems Biology
B304	A New Method for Computational Drug Repositioning Using Drug Pairwise Similarity	Jiao Li and Zhiyong Lu	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B306	Uncertain interactions affect degree distribution of biological networks	Andrei Todor, Alin Dobra, and Tamer Kahveci	Computational Systems Biology
B311	Linking and Querying Genomic Datasets Using Natural Language	Bobby McKnight and I. Budak Arpinar	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B316	A Basin Hopping Algorithm for Protein-protein Docking	Irina Hashmi and Amarda Shehu	Genomics and Molecular Structure, Function and Evolution
B317	ArcheERCASE: A CASE Tool for Modeling HIS Applications with Archetypes and Analysis Patterns	André Araújo, Valéria Times, and Marcus Silva	Healthcare Informatics
B338	Accurate detection of SNPs using base-specific cleavage and mass spectrometry	Ruimin Sun, Xiang Gao, Nanyu Han, Qiong Wu, Yuguang Mu, Kai Tang, and Xin Chen	Genomics and Molecular Structure, Function and Evolution
B342	A Broad-ranging and Cost-efficient Inter-Species Microarray based on the Measurement of Orthologous Gene Expression Levels with a Single Probe	Fukuzaki Mutsumi, Masa-aki Yoshida, Atsushi Ogura, and Jun Sese	Genomics and Molecular Structure, Function and Evolution
B351	An Automated Blood Vessel Extraction Algorithm in Fundus Images	Marwan Saleh and C. Eswaran	Medical Informatics and Translational Bioinformatics
B352	Finding Enriched Regions and Genomic Features in ChIP-Seq Data	Iman Rezaeian and Luis Rueda	Genomics and Molecular Structure, Function and Evolution
B353	A Comprehensive Comparison Study on Protein-protein Interaction Network Models	Mingyu Shao, Yi Yang, Jihong Guan, and Shuigeng Zhou	Genomics and Molecular Structure, Function and Evolution
B356	Formalization of clinical trial eligibility criteria: Evaluation of a pattern-based approach	Krystyna Milian, Anca Bucur, and Annette ten Teije	Healthcare Informatics
B358	Reconstructing Isoform Graphs from RNA-Seq data	Stefano Beretta, Paola Bonizzoni, Gianluca Della Vedova, and Raffaella Rizzi	Genomics and Molecular Structure, Function and Evolution
B362	Personalized Semantic Assistance for Curation of Biochemical Literature	Fedor Bakalov, Marie-Jean Meurs, Birgitta König-Ries, Bahar Sateli, René Witte, Greg Butler, and Adrian Tsang	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B371	CTGR-Span: Efficient Mining of Cross-Timepoint Gene Regulation Sequential Patterns from Microarray Datasets	Chun-Pei Cheng, Yi-Lin Tsai, and Vincent S. Tseng	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B372	The e!DAL JAVA-API: Store, Share and Cite Primary Data in Life Sciences	Daniel Arend, Matthias Lange, Christian Colmsee, Steffen Flemming, Jinbo Chen, and Uwe Scholz	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B374	An Efficient Algorithm for Spectral Clustering of Large-Scale Mass Spectrometry Data	Fahad Saeed, Trairak Pisitkun, Mark Knepper, and Jason Hoffert	Computational Systems Biology
B377	Robust RFCM Algorithm for Identification of Co-expressed miRNAs	Sushmita Paul and Pradipta Maji	Computational Systems Biology
B379	Skeleton Timed Up and Go	Okko Lohmann, Thomas Luhmann, and Andreas Hein	Healthcare Informatics
B393	THE HUMAN IMPRINTOME v1.0: OVER 120 GENES IMPRINTED IN THE HUMAN GENOME IMPOSE A MAJOR REVIEW ON PREVIOUS CENSUSES	Samara Silva-Santiago and Diana Magalhães-Oliveira	Genomics and Molecular Structure, Function and Evolution
B394	Improved biomarker performance for the detection of hepatocellular carcinoma by inclusion of clinical parameters	Mengjun Wang, Timothy Block, Jorge Marrero, Adrian Di Bisceglie, Karthik Devarajan, and Anand Mehta	Medical Informatics and Translational Bioinformatics
B395	Extracting BI-RADS Features from Portuguese Clinical Texts	Filipe Cunha, Inês Moreira, Houssam Nassif, Ricardo Cruz-Correia, Eliana Sousa, and Inês Dutra	Medical Informatics and Translational Bioinformatics
B409	A Model to Predict and Analyze Protein-protein Interaction Types Using Electrostatic Energies	Gokul Vasudev and Luis Rueda	Genomics and Molecular Structure, Function and Evolution
B411	Building a Classifier for Identifying Sentences Pertaining to Disease-Drug Relationships in Tardive Dyskinesia	Xia Bi, Hongzhan Huang, Sherri Matis-Mitchell, Peter McGarvey, Manabu Torii, Hagit Shatkay, and Cathy Wu	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B415	Using Gene Sets to Identify Putative Drugs for Breast Cancer	Tzu-Hung Hsiao, Hung-I Harry Chen, Yidong Chen, Yu-Heng Chen, and Eric Y. Chuang	Computational Systems Biology
B419	On the Design of Advanced Filters for Biological Networks using Graph Theoretic Properties	Kathryn Dempsey, Tzu-Yi Chen, Sanjukta Bhowmick, and Hesham Ali	Computational Systems Biology
B427	De Novo Co-Assembly of Bacterial Genomes from Multiple Single Cells	Narjes Movahedi, Elmirasadat Forouzmand, and Hamidreza Chitsaz	Genomics and Molecular Structure, Function and Evolution
B437	Maps, Rates, and Fuzzy Mountains: Generating Meaningful Risk Maps	Tamara Jimenez, Chetan Tiwari, Armin Mikler, and Marty O'Neill II	Healthcare Informatics
B439	Composition of Bioinformatics Scientific Model Federations using Communication Aspects	Keith Lee and David Stotts	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B441	MDAsim: a Multiple Displacement Amplification Simulator	Zeinab Taghavi and Sorin Draghici	Genomics and Molecular Structure, Function and Evolution
B458	ENISI Visual, an agent-based simulator for modeling gut immunity	Yongguo Mei, Raquel Hontecillas, Xiaoying Zhang, Keith Bisset, Stephen Eubank, Stefan Hoops, Madhav Marathe, and Josep Bassaganya-Riera	Cross-Cutting Computational Methods and Bioinformatics Infrastructure
B460	A Neural Network Approach to the Identification of b-/y-ions in MS/MS Spectra	James Cleveland and John Rose	Computational Systems Biology
B464	Stress induces biphasic-rewiring and modularization patterns in the metabolomic networks of Escherichia coli	Fayez Aziz, Philemon Chan, Johan Osorio, Bushra Minhas, Vaisak Parekatt, and Gustavo Caetano-Anolles	Computational Systems Biology
B470	Inferring Fuzzy Cognitive Map Models for Gene Regulatory Networks from Gene Expression Data	Ye Chen, Lawrence Mazlack, and Long Lu	Computational Systems Biology
B476	Discovering Distal Regulatory Elements by Integrating Multiple Types of Chromatin State Maps	Li Teng and Kai Tan	Computational Systems Biology
B478	Aligning Ligand Binding Cavities by Optimizing Superposed Volume	Ruobing Chen, Katya Scheinberg, and Brian Chen	Genomics and Molecular Structure, Function and Evolution
B483	Predicting Viral Infection by Selecting Informative Biomarkers From Temporal High-Dimensional Gene Expression Data	Qiang Lou and Zoran Obradovic	Healthcare Informatics
B489	ForeTell - Facilitating doctor-patient conversation through interactive information visualization of risk prediction index	Pratibha Bhaskaran, Milind Kaduskar, Preeti Saluja, Smitha Tallimani, Sandip Bhaumik, and Sanghyun Yoo	Healthcare Informatics
B491	Fully-automated Wound Identification System Based on Image Segmentation and Artificial Neural Networks	Bo Song and Ahmet Sacan	Medical Informatics and Translational Bioinformatics
B494	Drug-Drug Interaction Analysis Using Heterogeneous Biological Information Network	Kyubum Lee, Sunwon Lee, Minji Jeon, Jaehoon Choi, and Jaewoo Kang	Computational Systems Biology
B496	Placement of Unique Restriction Sites in Synthetic Genomes using Multi-Objective Optimization	Mahfuza Sharmin and Sohel Rahman	Cross-Cutting Computational Methods and Bioinformatics Infrastructure

Last update: 21 Dec 2011